{
  "_id": "6a27a9cd24555f66ed533d75",
  "Package": "annotables",
  "Type": "Package",
  "Title": "Ensembl Annotation Tables",
  "Version": "0.2.0",
  "Authors@R": "c(\nperson(\"Stephen\", \"Turner\",\nemail = \"vustephen@gmail.com\",\nrole = c(\"aut\", \"cre\")),\nperson(\"Michael J.\", \"Steinbaugh\",\nemail = \"mike@steinbaugh.com\",\nrole = \"ctb\"),\nperson(\"Aaron\", \"Wolen\",\nemail = \"aaron@wolen.com\",\nrole = \"ctb\"))",
  "Description": "Provides tables for converting and annotating Ensembl Gene\nIDs.",
  "URL": "https://github.com/stephenturner/annotables",
  "BugReports": "https://github.com/stephenturner/annotables/issues",
  "License": "GPL-3",
  "LazyData": "TRUE",
  "LazyDataCompression": "xz",
  "Roxygen": "list(markdown = TRUE)",
  "RoxygenNote": "7.3.2",
  "Repository": "https://laleoarrow.r-universe.dev",
  "Date/Publication": "2025-07-06 22:12:12 UTC",
  "RemoteUrl": "https://github.com/stephenturner/annotables",
  "RemoteRef": "HEAD",
  "RemoteSha": "5bf7dc053e88d850d9acdca943289e688f0a1d4f",
  "NeedsCompilation": "no",
  "Packaged": {
    "Date": "2026-06-08 08:03:04 UTC",
    "User": "root"
  },
  "Author": "Stephen Turner [aut, cre],\nMichael J. Steinbaugh [ctb],\nAaron Wolen [ctb]",
  "Maintainer": "Stephen Turner <vustephen@gmail.com>",
  "MD5sum": "a3a2dfe0447b0ab548776dddf60899ae",
  "_user": "laleoarrow",
  "_type": "src",
  "_file": "annotables_0.2.0.tar.gz",
  "_fileid": "41eff39d7806caa24d3de78942d21b3554e8b0042bcdc215fa5e5a6e2ca6fd04",
  "_filesize": 10993317,
  "_sha256": "41eff39d7806caa24d3de78942d21b3554e8b0042bcdc215fa5e5a6e2ca6fd04",
  "_created": "2026-06-08T08:03:04.000Z",
  "_published": "2026-06-09T05:51:09.549Z",
  "_distro": "noble",
  "_jobs": [
    {
      "job": 80256790499,
      "time": 191,
      "config": "linux-devel-x86_64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "7474637769"
    },
    {
      "job": 80256790555,
      "time": 192,
      "config": "linux-release-x86_64",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7474637618"
    },
    {
      "job": 80256790415,
      "time": 149,
      "config": "macos-oldrel-arm64",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "7474623674"
    },
    {
      "job": 80256790699,
      "time": 157,
      "config": "macos-release-arm64",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7474626445"
    },
    {
      "job": 80256790302,
      "time": 371,
      "config": "source",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7474574135"
    },
    {
      "job": 80256790676,
      "time": 162,
      "config": "wasm-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7474628210"
    },
    {
      "job": 80256790492,
      "time": 161,
      "config": "windows-devel",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "7474627639"
    },
    {
      "job": 80256790165,
      "time": 127,
      "config": "windows-oldrel",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "7499522846"
    },
    {
      "job": 80256790171,
      "time": 133,
      "config": "windows-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7499524063"
    }
  ],
  "_buildurl": "https://github.com/r-universe/laleoarrow/actions/runs/27123885702",
  "_status": "success",
  "_host": "GitHub-Actions",
  "_upstream": "https://github.com/stephenturner/annotables",
  "_commit": {
    "id": "5bf7dc053e88d850d9acdca943289e688f0a1d4f",
    "author": "Stephen Turner <460076+stephenturner@users.noreply.github.com>",
    "committer": "GitHub <noreply@github.com>",
    "message": "Merge pull request #27 from ToledoEM/master\n\nMore species (Dog, Pig, ZebraFish)",
    "time": 1751839932
  },
  "_maintainer": {
    "name": "Stephen Turner",
    "email": "vustephen@gmail.com",
    "login": "stephenturner",
    "bluesky": "@stephenturner.us",
    "linkedin": "in/turnersd",
    "twitter": "@strnr",
    "description": "Associate Professor at the University of Virginia School of Data Science.",
    "uuid": 460076
  },
  "_registered": true,
  "_dependencies": [
    {
      "package": "R",
      "version": ">= 3.5.0",
      "role": "Depends"
    },
    {
      "package": "tibble",
      "role": "Imports"
    },
    {
      "package": "devtools",
      "role": "Suggests"
    },
    {
      "package": "dplyr",
      "role": "Suggests"
    },
    {
      "package": "knitr",
      "role": "Suggests"
    },
    {
      "package": "rlang",
      "role": "Suggests"
    },
    {
      "package": "rmarkdown",
      "role": "Suggests"
    },
    {
      "package": "whisker",
      "role": "Suggests"
    },
    {
      "package": "yaml",
      "role": "Suggests"
    }
  ],
  "_owner": "stephenturner",
  "_selfowned": false,
  "_usedby": 1,
  "_updates": [
    {
      "week": "2025-27",
      "n": 1
    }
  ],
  "_tags": [],
  "_stars": 170,
  "_contributors": [
    {
      "user": "stephenturner",
      "count": 35,
      "uuid": 460076
    },
    {
      "user": "mjsteinbaugh",
      "count": 14,
      "uuid": 1760218
    },
    {
      "user": "aaronwolen",
      "count": 11,
      "uuid": 1067915
    },
    {
      "user": "mdozmorov",
      "count": 4,
      "uuid": 864945
    },
    {
      "user": "toledoem",
      "count": 2,
      "uuid": 8144940
    },
    {
      "user": "khughitt",
      "count": 1,
      "uuid": 125001
    }
  ],
  "_userbio": {
    "uuid": 127536391,
    "type": "user",
    "name": "Ao Lu"
  },
  "_downloads": {
    "count": 0,
    "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/annotables"
  },
  "_devurl": "https://github.com/stephenturner/annotables",
  "_searchresults": 635,
  "_rbuild": "4.6.0",
  "_assets": [
    "extra/annotables.html",
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
    "extra/NEWS.html",
    "extra/NEWS.txt",
    "manual.pdf"
  ],
  "_cranurl": false,
  "_exports": [],
  "_datasets": [
    {
      "name": "bdgp6",
      "title": "Fruitfly annotation data",
      "object": "bdgp6",
      "class": [
        "tbl_df",
        "tbl",
        "data.frame"
      ],
      "fields": [
        "ensgene",
        "entrez",
        "symbol",
        "chr",
        "start",
        "end",
        "strand",
        "biotype",
        "description"
      ],
      "rows": 26383,
      "table": true,
      "tojson": true
    },
    {
      "name": "bdgp6_tx2gene",
      "title": "Fruitfly transcripts to genes",
      "object": "bdgp6_tx2gene",
      "class": [
        "tbl_df",
        "tbl",
        "data.frame"
      ],
      "fields": [
        "enstxp",
        "ensgene"
      ],
      "rows": 41600,
      "table": true,
      "tojson": true
    },
    {
      "name": "cfamiliaris",
      "title": "Dog gene annotation table",
      "object": "cfamiliaris",
      "class": [
        "tbl_df",
        "tbl",
        "data.frame"
      ],
      "fields": [
        "ensgene",
        "entrez",
        "symbol",
        "chr",
        "start",
        "end",
        "strand",
        "biotype",
        "description"
      ],
      "rows": 33778,
      "table": true,
      "tojson": true
    },
    {
      "name": "cfamiliaris_tx2gene",
      "title": "Dog transcript-to-gene table",
      "object": "cfamiliaris_tx2gene",
      "class": [
        "tbl_df",
        "tbl",
        "data.frame"
      ],
      "fields": [
        "enstxp",
        "ensgene"
      ],
      "rows": 55335,
      "table": true,
      "tojson": true
    },
    {
      "name": "drerio",
      "title": "Zebrafish gene annotation table",
      "object": "drerio",
      "class": [
        "tbl_df",
        "tbl",
        "data.frame"
      ],
      "fields": [
        "ensgene",
        "entrez",
        "symbol",
        "chr",
        "start",
        "end",
        "strand",
        "biotype",
        "description"
      ],
      "rows": 75850,
      "table": true,
      "tojson": true
    },
    {
      "name": "drerio_tx2gene",
      "title": "Zebrafish transcript-to-gene table",
      "object": "drerio_tx2gene",
      "class": [
        "tbl_df",
        "tbl",
        "data.frame"
      ],
      "fields": [
        "enstxp",
        "ensgene"
      ],
      "rows": 65905,
      "table": true,
      "tojson": true
    },
    {
      "name": "ensembl_version",
      "title": "Ensembl version used for build",
      "object": "ensembl_version",
      "class": [
        "character"
      ],
      "fields": [],
      "table": false,
      "tojson": true
    },
    {
      "name": "galgal5",
      "title": "Chicken annotation data",
      "object": "galgal5",
      "class": [
        "tbl_df",
        "tbl",
        "data.frame"
      ],
      "fields": [
        "ensgene",
        "entrez",
        "symbol",
        "chr",
        "start",
        "end",
        "strand",
        "biotype",
        "description"
      ],
      "rows": 34332,
      "table": true,
      "tojson": true
    },
    {
      "name": "galgal5_tx2gene",
      "title": "Chicken transcripts to genes",
      "object": "galgal5_tx2gene",
      "class": [
        "tbl_df",
        "tbl",
        "data.frame"
      ],
      "fields": [
        "enstxp",
        "ensgene"
      ],
      "rows": 72689,
      "table": true,
      "tojson": true
    },
    {
      "name": "grch37",
      "title": "Human annotation data",
      "object": "grch37",
      "class": [
        "tbl_df",
        "tbl",
        "data.frame"
      ],
      "fields": [
        "ensgene",
        "entrez",
        "symbol",
        "chr",
        "start",
        "end",
        "strand",
        "biotype",
        "description"
      ],
      "rows": 66978,
      "table": true,
      "tojson": true
    },
    {
      "name": "grch37_tx2gene",
      "title": "Human transcripts to genes",
      "object": "grch37_tx2gene",
      "class": [
        "tbl_df",
        "tbl",
        "data.frame"
      ],
      "fields": [
        "enstxp",
        "ensgene"
      ],
      "rows": 215170,
      "table": true,
      "tojson": true
    },
    {
      "name": "grch38",
      "title": "Human annotation data",
      "object": "grch38",
      "class": [
        "tbl_df",
        "tbl",
        "data.frame"
      ],
      "fields": [
        "ensgene",
        "entrez",
        "symbol",
        "chr",
        "start",
        "end",
        "strand",
        "biotype",
        "description"
      ],
      "rows": 91673,
      "table": true,
      "tojson": true
    },
    {
      "name": "grch38_tx2gene",
      "title": "Human transcripts to genes",
      "object": "grch38_tx2gene",
      "class": [
        "tbl_df",
        "tbl",
        "data.frame"
      ],
      "fields": [
        "enstxp",
        "ensgene"
      ],
      "rows": 412044,
      "table": true,
      "tojson": true
    },
    {
      "name": "grcm38",
      "title": "Mouse annotation data",
      "object": "grcm38",
      "class": [
        "tbl_df",
        "tbl",
        "data.frame"
      ],
      "fields": [
        "ensgene",
        "entrez",
        "symbol",
        "chr",
        "start",
        "end",
        "strand",
        "biotype",
        "description"
      ],
      "rows": 78630,
      "table": true,
      "tojson": true
    },
    {
      "name": "grcm38_tx2gene",
      "title": "Mouse transcripts to genes",
      "object": "grcm38_tx2gene",
      "class": [
        "tbl_df",
        "tbl",
        "data.frame"
      ],
      "fields": [
        "enstxp",
        "ensgene"
      ],
      "rows": 278369,
      "table": true,
      "tojson": true
    },
    {
      "name": "mmul801",
      "title": "Macaque annotation data",
      "object": "mmul801",
      "class": [
        "tbl_df",
        "tbl",
        "data.frame"
      ],
      "fields": [
        "ensgene",
        "entrez",
        "symbol",
        "chr",
        "start",
        "end",
        "strand",
        "biotype",
        "description"
      ],
      "rows": 36086,
      "table": true,
      "tojson": true
    },
    {
      "name": "mmul801_tx2gene",
      "title": "Macaque transcripts to genes",
      "object": "mmul801_tx2gene",
      "class": [
        "tbl_df",
        "tbl",
        "data.frame"
      ],
      "fields": [
        "enstxp",
        "ensgene"
      ],
      "rows": 64228,
      "table": true,
      "tojson": true
    },
    {
      "name": "rnor6",
      "title": "Rat annotation data",
      "object": "rnor6",
      "class": [
        "tbl_df",
        "tbl",
        "data.frame"
      ],
      "fields": [
        "ensgene",
        "entrez",
        "symbol",
        "chr",
        "start",
        "end",
        "strand",
        "biotype",
        "description"
      ],
      "rows": 57961,
      "table": true,
      "tojson": true
    },
    {
      "name": "rnor6_tx2gene",
      "title": "Rat transcripts to genes",
      "object": "rnor6_tx2gene",
      "class": [
        "tbl_df",
        "tbl",
        "data.frame"
      ],
      "fields": [
        "enstxp",
        "ensgene"
      ],
      "rows": 95472,
      "table": true,
      "tojson": true
    },
    {
      "name": "sscrofa",
      "title": "Pig annotation data",
      "object": "sscrofa",
      "class": [
        "tbl_df",
        "tbl",
        "data.frame"
      ],
      "fields": [
        "ensgene",
        "entrez",
        "symbol",
        "chr",
        "start",
        "end",
        "strand",
        "biotype",
        "description"
      ],
      "rows": 35819,
      "table": true,
      "tojson": true
    },
    {
      "name": "sscrofa_tx2gene",
      "title": "Pig transcripts to genes",
      "object": "sscrofa_tx2gene",
      "class": [
        "tbl_df",
        "tbl",
        "data.frame"
      ],
      "fields": [
        "enstxp",
        "ensgene"
      ],
      "rows": 60440,
      "table": true,
      "tojson": true
    },
    {
      "name": "wbcel235",
      "title": "Roundworm annotation data",
      "object": "wbcel235",
      "class": [
        "tbl_df",
        "tbl",
        "data.frame"
      ],
      "fields": [
        "ensgene",
        "entrez",
        "symbol",
        "chr",
        "start",
        "end",
        "strand",
        "biotype",
        "description"
      ],
      "rows": 49077,
      "table": true,
      "tojson": true
    },
    {
      "name": "wbcel235_tx2gene",
      "title": "Roundworm transcripts to genes",
      "object": "wbcel235_tx2gene",
      "class": [
        "tbl_df",
        "tbl",
        "data.frame"
      ],
      "fields": [
        "enstxp",
        "ensgene"
      ],
      "rows": 60000,
      "table": true,
      "tojson": true
    }
  ],
  "_help": [
    {
      "page": "annotables-package",
      "title": "annotables",
      "topics": [
        "annotables-package",
        "annotables"
      ]
    },
    {
      "page": "bdgp6",
      "title": "Fruitfly annotation data",
      "topics": [
        "bdgp6"
      ]
    },
    {
      "page": "bdgp6_tx2gene",
      "title": "Fruitfly transcripts to genes",
      "topics": [
        "bdgp6_tx2gene"
      ]
    },
    {
      "page": "cfamiliaris",
      "title": "Dog gene annotation table",
      "topics": [
        "cfamiliaris"
      ]
    },
    {
      "page": "cfamiliaris_tx2gene",
      "title": "Dog transcript-to-gene table",
      "topics": [
        "cfamiliaris_tx2gene"
      ]
    },
    {
      "page": "drerio",
      "title": "Zebrafish gene annotation table",
      "topics": [
        "drerio"
      ]
    },
    {
      "page": "drerio_tx2gene",
      "title": "Zebrafish transcript-to-gene table",
      "topics": [
        "drerio_tx2gene"
      ]
    },
    {
      "page": "ensembl_version",
      "title": "Ensembl version used for build",
      "topics": [
        "ensembl_version"
      ]
    },
    {
      "page": "galgal5",
      "title": "Chicken annotation data",
      "topics": [
        "galgal5"
      ]
    },
    {
      "page": "galgal5_tx2gene",
      "title": "Chicken transcripts to genes",
      "topics": [
        "galgal5_tx2gene"
      ]
    },
    {
      "page": "grch37",
      "title": "Human annotation data",
      "topics": [
        "grch37"
      ]
    },
    {
      "page": "grch37_tx2gene",
      "title": "Human transcripts to genes",
      "topics": [
        "grch37_tx2gene"
      ]
    },
    {
      "page": "grch38",
      "title": "Human annotation data",
      "topics": [
        "grch38"
      ]
    },
    {
      "page": "grch38_tx2gene",
      "title": "Human transcripts to genes",
      "topics": [
        "grch38_tx2gene"
      ]
    },
    {
      "page": "grcm38",
      "title": "Mouse annotation data",
      "topics": [
        "grcm38"
      ]
    },
    {
      "page": "grcm38_tx2gene",
      "title": "Mouse transcripts to genes",
      "topics": [
        "grcm38_tx2gene"
      ]
    },
    {
      "page": "mmul801",
      "title": "Macaque annotation data",
      "topics": [
        "mmul801"
      ]
    },
    {
      "page": "mmul801_tx2gene",
      "title": "Macaque transcripts to genes",
      "topics": [
        "mmul801_tx2gene"
      ]
    },
    {
      "page": "rnor6",
      "title": "Rat annotation data",
      "topics": [
        "rnor6"
      ]
    },
    {
      "page": "rnor6_tx2gene",
      "title": "Rat transcripts to genes",
      "topics": [
        "rnor6_tx2gene"
      ]
    },
    {
      "page": "sscrofa",
      "title": "Pig annotation data",
      "topics": [
        "sscrofa"
      ]
    },
    {
      "page": "sscrofa_tx2gene",
      "title": "Pig transcripts to genes",
      "topics": [
        "sscrofa_tx2gene"
      ]
    },
    {
      "page": "wbcel235",
      "title": "Roundworm annotation data",
      "topics": [
        "wbcel235"
      ]
    },
    {
      "page": "wbcel235_tx2gene",
      "title": "Roundworm transcripts to genes",
      "topics": [
        "wbcel235_tx2gene"
      ]
    }
  ],
  "_rundeps": [
    "cli",
    "glue",
    "lifecycle",
    "magrittr",
    "pillar",
    "pkgconfig",
    "rlang",
    "tibble",
    "utf8",
    "vctrs"
  ],
  "_score": 6.2093139057259314,
  "_indexed": false,
  "_nocasepkg": "annotables",
  "_universes": [
    "laleoarrow"
  ],
  "_binaries": [
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "0.2.0",
      "date": "2026-06-08T08:07:08.000Z",
      "distro": "noble",
      "commit": "5bf7dc053e88d850d9acdca943289e688f0a1d4f",
      "fileid": "5eb78cfbbc86dce2a7709561a9b5164374384a67a6aa6195d5dac2debb83c036",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/laleoarrow/actions/runs/27123885702"
    },
    {
      "r": "4.6.0",
      "os": "linux",
      "version": "0.2.0",
      "date": "2026-06-08T08:07:18.000Z",
      "distro": "noble",
      "commit": "5bf7dc053e88d850d9acdca943289e688f0a1d4f",
      "fileid": "4d8e436b371fd75646dad09a6592e9544f990c7fbfbf7dc7e0b6d48961a1b4ab",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/laleoarrow/actions/runs/27123885702"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "0.2.0",
      "date": "2026-06-08T08:06:37.000Z",
      "commit": "5bf7dc053e88d850d9acdca943289e688f0a1d4f",
      "fileid": "97a324f68ce746c15214f03d75478e72cb16baa6576a82f9e225358f9d3e44b5",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/laleoarrow/actions/runs/27123885702"
    },
    {
      "r": "4.6.0",
      "os": "mac",
      "version": "0.2.0",
      "date": "2026-06-08T08:06:43.000Z",
      "commit": "5bf7dc053e88d850d9acdca943289e688f0a1d4f",
      "fileid": "981f79d39dc30a5a9afbed978cfb57fd42e2a6c0b838ec78f98c20e760474dcc",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/laleoarrow/actions/runs/27123885702"
    },
    {
      "r": "4.6.0",
      "os": "wasm",
      "version": "0.2.0",
      "date": "2026-06-08T08:07:14.000Z",
      "commit": "5bf7dc053e88d850d9acdca943289e688f0a1d4f",
      "fileid": "237c6536f685d5fdd362f7210671cccff2b65d84ba5a0681ffe0aef0963d33ac",
      "status": "success",
      "buildurl": "https://github.com/r-universe/laleoarrow/actions/runs/27123885702"
    },
    {
      "r": "4.7.0",
      "os": "win",
      "version": "0.2.0",
      "date": "2026-06-08T08:06:33.000Z",
      "commit": "5bf7dc053e88d850d9acdca943289e688f0a1d4f",
      "fileid": "26aa5f6750bc832ba239422e64b168f71f0971002bdb9a95a7038ffabe72d1c2",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/laleoarrow/actions/runs/27123885702"
    },
    {
      "r": "4.5.3",
      "os": "win",
      "version": "0.2.0",
      "date": "2026-06-09T05:49:29.000Z",
      "commit": "5bf7dc053e88d850d9acdca943289e688f0a1d4f",
      "fileid": "12f355caf08156e0ecd4edd54ac8dd6fd2dc383c65f948b182fca009d4dd55bf",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/laleoarrow/actions/runs/27123885702"
    },
    {
      "r": "4.6.0",
      "os": "win",
      "version": "0.2.0",
      "date": "2026-06-09T05:49:33.000Z",
      "commit": "5bf7dc053e88d850d9acdca943289e688f0a1d4f",
      "fileid": "06a4d37451de16b378774bfc2d407e566bb15f2ef81b9aee808d253502d94614",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/laleoarrow/actions/runs/27123885702"
    }
  ]
}